Web links are indicated below with themes that run throughout our lab, including biomarker discovery, proteomics, mass spectrometry, and small molecule research.

Helpful Mass Spectrometry/ Proteomics Sites

Delta Mass; help determining potential mass shifts

i-mass; many educational notes on and links to mass spectrometry

cprmap; a great way to get the latest in mass spectrometry driven clinical proteomics information

Spectroscopy Now; this is a great site that lends to all of spectroscopy including mass spectrometry

Ionsource; this site has a great deal of information from nano-hplc to mass spectrometry

Seattle Proteome Center (SPC); protocols for general and quantitative proteomics applications

Fixing Proteomics Campaign (sponsored by nonlinear dynamics); a group that is bringing some of the problems involved in carrying out MS-driven proteomics correctly.

Proteome 2D PAGE Database (hosted by the Max Plank Institute for Infection Biology)

 

Urologic Cancer Research

Lerner Research Institute, Cleveland Clinic, Cleveland Ohio

University of Rochester Medical Center, Rochester Minnesota

OBrian Kidney and Urologic Research Centers, NIDDK

MD Anderson, Bladder SPORE Program

Dana Farber/ Harvard, Kidney Cancer SPORE Program

 

Mass Spectrometry & Proteomics Associated Societies & Journals

American Society for Mass Spectrometry (ASMS):

This is a key institution for anyone wanting to get into and stay up with the latest in mass spectrometry.

American Chemical Society (ACS):

All around basic sciences at its best with separations, mass spectrometry, & ground breaking work at the foundation.

Human Proteome Organization (HUPO):

This is an international community of scientists interested in promoting clinical proteomics.

Association of Biomolecular Resources Facilities (ABRF):

This is an international society who’s focus is to improve and advance the technologies which drive the latest in biological sciences.

Early Detection Network (EDRN):

This is an NIH/ NCI driven community with a focus on identifying early non-invasive markers for cancer detection

 

Mass Spectrometry Labs Around the U.S.A.

Richard M. Caprioli, Ph.D., Vanderbilt University

Robert J. Cotter, Ph.D., John Hopkins

Donald F. Hunt, Ph.D., University of Virginia

David E. Clemmer, Ph.D., Indiana University

Alan G. Marshall, Ph.D., Florida State University

R. Graham Cooks, Ph.D., Purdue University

Scott A. McLuckey, Ph.D., Purdue University

Rudolph Aebersold, Ph.D., Institute for Systems Biology

Fred E. Regnier, Ph.D., Purdue University

John R. Yates, Ph.D., The Scripts Research Institute

Richard D. Smith, Ph.D., Pacific Northwest National Labs

Catherine Fenselau, Ph.D., University of Maryland

Gary Siuzdak, Ph.D., Scripps Center for Mass Spectrometry

Neil L. Kelleher, Ph.D., University of Illinois at Urbana

 

 

Systems Biology Sites

Institute for Systems Biology (ISB), Seattle Washington

Cytoscape at ISB, Seattle Washington

Kyoto Encyclopedia of Genes and Genomics (KEGG), Kyoto Japan

The Systems Biology Institute (SBI), Tokyo Japan

Protein Analysis Through Evolutionary Relationships (PAnThER)

Finding a Cure Through Discovery Based Sciences

Useful Links